Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LAGE3P1-201ENST00000425356 484 ntBASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC009947.1-201ENST00000444350 727 ntBASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 AL499627.1-201ENST00000569373 2188 ntBASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LOC102724428A0A0B4J2F2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
LOC102724428A0A0B4J2F2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC079781.4-201ENST00000641908 219 ntBASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.13■■□□□ 1.29
LOC102724428A0A0B4J2F2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 AC002347.1-201ENST00000569543 541 ntBASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.12■■□□□ 1.29
LOC102724428A0A0B4J2F2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
LOC102724428A0A0B4J2F2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms