Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
DDX49Q9Y6V7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
DDX49Q9Y6V7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
DDX49Q9Y6V7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 AL023803.3-201ENST00000615559 522 ntBASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 ESPNP-201ENST00000270691 2015 ntBASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 AC092338.2-201ENST00000568827 1415 ntBASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DDX49Q9Y6V7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 AC128688.1-201ENST00000487626 519 ntBASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX49Q9Y6V7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 AL162741.1-201ENST00000565563 1558 ntBASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 AC116562.4-202ENST00000641738 218 ntBASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX49Q9Y6V7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 HMGA1P5-201ENST00000412453 271 ntBASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX49Q9Y6V7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms