Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 AL645608.8-201ENST00000606034 2086 ntBASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 AC091390.4-202ENST00000476426 537 ntBASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CR392000.1-201ENST00000624770 1228 ntBASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB4Q9UN71 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 AC068587.9-201ENST00000641814 219 ntBASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 KRT8P32-201ENST00000512863 1461 ntBASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB4Q9UN71 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms