Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL4Q9UJQ4 LINC01126-201ENST00000623515 1646 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 MIR1224-201ENST00000408193 85 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 AC012306.2-201ENST00000609350 630 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 AC009053.2-201ENST00000563701 2365 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 AC099398.1-201ENST00000567919 2776 ntBASIC19.43■□□□□ 0.7
SALL4Q9UJQ4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 AC141586.5-201ENST00000624546 2050 ntBASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL4Q9UJQ4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 NUDT16P1-203ENST00000513809 620 ntBASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 MIR3180-5-201ENST00000583743 153 ntBASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 AC009102.3-201ENST00000623118 1491 ntBASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL4Q9UJQ4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms