Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SPDYE13P-201ENST00000445314 798 ntBASIC16.97■□□□□ 0.31
HPF1Q9NWY4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 AC069148.1-201ENST00000608741 768 ntBASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 TNXA-203ENST00000507684 2038 ntBASIC16.97■□□□□ 0.31
HPF1Q9NWY4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPF1Q9NWY4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.97■□□□□ 0.31
HPF1Q9NWY4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 PVRIG2P-201ENST00000435460 978 ntBASIC16.96■□□□□ 0.31
HPF1Q9NWY4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 AC093458.2-201ENST00000623150 629 ntBASIC16.96■□□□□ 0.31
HPF1Q9NWY4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HPF1Q9NWY4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.96■□□□□ 0.3
HPF1Q9NWY4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.95■□□□□ 0.3
HPF1Q9NWY4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.95■□□□□ 0.3
HPF1Q9NWY4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 AC112777.1-201ENST00000540175 1423 ntBASIC16.95■□□□□ 0.3
HPF1Q9NWY4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPF1Q9NWY4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms