Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AL645608.8-201ENST00000606034 2086 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 REXO1L9P-201ENST00000604264 2108 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC026271.2-201ENST00000428091 497 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PNMA6B-201ENST00000538162 1200 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 RCC2P6-201ENST00000526625 1557 ntBASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SND1-IT1Q9HBX3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 TNRC18P3-201ENST00000441896 2691 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 AC026185.1-201ENST00000445748 174 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 RARRES2P6-201ENST00000567333 442 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 AC060766.5-201ENST00000590539 871 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms