Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FAAHP1-202ENST00000446499 1238 ntBASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 AC092597.1-201ENST00000487352 616 ntBASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 AC011498.5-201ENST00000592027 486 ntBASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR1BQ9H9Y6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 FDX1P1-201ENST00000449115 551 ntBASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 BCL2-203ENST00000589955 5011 ntBASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
POLR1BQ9H9Y6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 AL845331.1-201ENST00000424978 1190 ntBASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR1BQ9H9Y6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 AC016734.2-201ENST00000624325 1377 ntBASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms