Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 AC073912.3-201ENST00000624414 853 ntBASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 KRT16P1-201ENST00000399124 1418 ntBASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.13■□□□□ 0.33
AMBRA1Q9C0C7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 AC130371.2-201ENST00000619443 611 ntBASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 CR392000.1-201ENST00000624770 1228 ntBASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AMBRA1Q9C0C7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 AL109659.2-201ENST00000606809 1674 ntBASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 AL031985.4-201ENST00000642138 673 ntBASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AMBRA1Q9C0C7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 FAM210CP-201ENST00000445714 574 ntBASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 FAM207BP-201ENST00000447172 505 ntBASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 SNORA78-201ENST00000459373 127 ntBASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
AMBRA1Q9C0C7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
AMBRA1Q9C0C7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms