Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ZNF444P1-201ENST00000559497 298 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MIR3917-201ENST00000580971 93 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 HYMAI.1-201ENST00000620949 238 ntBASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK3BQ9BT76 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 LINC01311-201ENST00000565162 1445 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 AC005332.7-201ENST00000614046 2005 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 AC011270.2-201ENST00000624293 2550 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 FAM86EP-206ENST00000510506 987 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 AC083849.1-201ENST00000615227 514 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 AC083906.6-201ENST00000641366 219 ntBASIC12.73□□□□□ -0.37
UPK3BQ9BT76 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK3BQ9BT76 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 HBZP1-201ENST00000354915 429 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 AP000593.1-201ENST00000393668 712 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 PCED1CP-201ENST00000419887 785 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 KRT18P41-201ENST00000518924 1277 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 AC010240.3-201ENST00000607688 395 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 AL358472.4-201ENST00000633140 710 ntBASIC12.72□□□□□ -0.37
UPK3BQ9BT76 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK3BQ9BT76 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms