Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 AC074051.2-201ENST00000565115 352 ntBASIC17.7■□□□□ 0.42
SLC38A3Q99624 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SLC38A3Q99624 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC38A3Q99624 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AL499627.1-201ENST00000569373 2188 ntBASIC17.69■□□□□ 0.42
SLC38A3Q99624 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 LINC01711-201ENST00000598340 967 ntBASIC17.69■□□□□ 0.42
SLC38A3Q99624 AL121772.3-201ENST00000610840 674 ntBASIC17.69■□□□□ 0.42
SLC38A3Q99624 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC004263.2-201ENST00000617183 678 ntBASIC17.69■□□□□ 0.42
SLC38A3Q99624 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC38A3Q99624 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC38A3Q99624 AC020763.4-201ENST00000623414 4170 ntBASIC17.69■□□□□ 0.42
SLC38A3Q99624 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
SLC38A3Q99624 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 FOSL1P1-201ENST00000511041 816 ntBASIC17.68■□□□□ 0.42
SLC38A3Q99624 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 LINC00167-201ENST00000530583 1419 ntBASIC17.68■□□□□ 0.42
SLC38A3Q99624 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AC011840.4-201ENST00000578471 627 ntBASIC17.68■□□□□ 0.42
SLC38A3Q99624 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC38A3Q99624 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A3Q99624 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A3Q99624 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 SDHAP2-201ENST00000455183 2001 ntBASIC17.67■□□□□ 0.42
SLC38A3Q99624 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A3Q99624 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A3Q99624 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A3Q99624 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A3Q99624 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A3Q99624 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms