Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 AL138781.1-201ENST00000566567 1274 ntBASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 AC092368.3-202ENST00000574180 1591 ntBASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 AL357033.4-201ENST00000617703 1807 ntBASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 RPS2P52-201ENST00000469610 820 ntBASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHMP6Q96FZ7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 KRT8P32-201ENST00000512863 1461 ntBASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP6Q96FZ7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP6Q96FZ7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms