Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.67■□□□□ 0.42
COL26A1Q96A83 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 AC034232.1-201ENST00000506026 1064 ntBASIC17.66■□□□□ 0.42
COL26A1Q96A83 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
COL26A1Q96A83 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL26A1Q96A83 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 HEIH-201ENST00000623091 1652 ntBASIC17.65■□□□□ 0.42
COL26A1Q96A83 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 KRT18P23-201ENST00000435622 1283 ntBASIC17.65■□□□□ 0.42
COL26A1Q96A83 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
COL26A1Q96A83 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL26A1Q96A83 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.64■□□□□ 0.42
COL26A1Q96A83 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COL26A1Q96A83 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.64■□□□□ 0.42
COL26A1Q96A83 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL26A1Q96A83 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL26A1Q96A83 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL26A1Q96A83 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.64■□□□□ 0.42
COL26A1Q96A83 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.64■□□□□ 0.42
COL26A1Q96A83 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COL26A1Q96A83 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL26A1Q96A83 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms