Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF34Q969K3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RNF34Q969K3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RNF34Q969K3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF34Q969K3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 LINC01311-201ENST00000565162 1445 ntBASIC19.12■□□□□ 0.65
RNF34Q969K3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF34Q969K3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RNF34Q969K3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF34Q969K3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.12■□□□□ 0.65
RNF34Q969K3 AL671277.2-201ENST00000458060 996 ntBASIC19.12■□□□□ 0.65
RNF34Q969K3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 KRT18P35-201ENST00000510488 1269 ntBASIC19.12■□□□□ 0.65
RNF34Q969K3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RNF34Q969K3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF34Q969K3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF34Q969K3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 AL445228.2-201ENST00000605589 952 ntBASIC19.12■□□□□ 0.65
RNF34Q969K3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.12■□□□□ 0.65
RNF34Q969K3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF34Q969K3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
RNF34Q969K3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF34Q969K3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF34Q969K3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF34Q969K3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RNF34Q969K3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF34Q969K3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF34Q969K3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 AC092597.1-201ENST00000487352 616 ntBASIC19.11■□□□□ 0.65
RNF34Q969K3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF34Q969K3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RNF34Q969K3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF34Q969K3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RNF34Q969K3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF34Q969K3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF34Q969K3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RNF34Q969K3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 AC073592.3-201ENST00000625118 1834 ntBASIC19.1■□□□□ 0.65
RNF34Q969K3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF34Q969K3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF34Q969K3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 AL136038.4-201ENST00000603606 1261 ntBASIC19.1■□□□□ 0.65
RNF34Q969K3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
RNF34Q969K3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF34Q969K3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF34Q969K3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF34Q969K3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF34Q969K3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF34Q969K3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF34Q969K3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF34Q969K3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF34Q969K3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF34Q969K3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF34Q969K3 AL391807.1-203ENST00000604392 2365 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms