Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 RNA5SP416-201ENST00000516838 111 ntBASIC23.3■■□□□ 1.32
SMARCC1Q92922 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMARCC1Q92922 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC1Q92922 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 AC004832.2-201ENST00000426397 482 ntBASIC23.29■■□□□ 1.32
SMARCC1Q92922 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.29■■□□□ 1.32
SMARCC1Q92922 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 AL355385.1-201ENST00000606123 409 ntBASIC23.29■■□□□ 1.32
SMARCC1Q92922 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.29■■□□□ 1.32
SMARCC1Q92922 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC1Q92922 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.28■■□□□ 1.32
SMARCC1Q92922 LAGE3P1-201ENST00000425356 484 ntBASIC23.28■■□□□ 1.32
SMARCC1Q92922 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AC004967.1-201ENST00000453589 447 ntBASIC23.28■■□□□ 1.32
SMARCC1Q92922 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC1Q92922 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 AP000867.4-201ENST00000641616 219 ntBASIC23.27■■□□□ 1.32
SMARCC1Q92922 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC1Q92922 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC1Q92922 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 AP002414.3-201ENST00000589352 1468 ntBASIC23.26■■□□□ 1.31
SMARCC1Q92922 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 RPS8P6-201ENST00000426177 609 ntBASIC23.26■■□□□ 1.31
SMARCC1Q92922 AC112698.1-201ENST00000510299 916 ntBASIC23.26■■□□□ 1.31
SMARCC1Q92922 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms