Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 AC132872.1-201ENST00000566986 1195 ntBASIC18.51■□□□□ 0.55
PTCD2Q8WV60 AC087388.1-201ENST00000571370 1112 ntBASIC18.51■□□□□ 0.55
PTCD2Q8WV60 AC140113.3-201ENST00000605663 199 ntBASIC18.51■□□□□ 0.55
PTCD2Q8WV60 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCD2Q8WV60 SDHAP2-201ENST00000455183 2001 ntBASIC18.5■□□□□ 0.55
PTCD2Q8WV60 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 SLC25A6P5-201ENST00000435663 894 ntBASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCD2Q8WV60 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 SPDYE15P-201ENST00000424157 909 ntBASIC18.49■□□□□ 0.55
PTCD2Q8WV60 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.49■□□□□ 0.55
PTCD2Q8WV60 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms