Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 AC091874.3-201ENST00000512672 1195 ntBASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 AC092437.1-201ENST00000624794 1048 ntBASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNIH3Q8TBE1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 MIPEPP3-201ENST00000412105 444 ntBASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 AC099343.3-201ENST00000605834 2503 ntBASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CNIH3Q8TBE1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CNIH3Q8TBE1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNIH3Q8TBE1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CNIH3Q8TBE1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNIH3Q8TBE1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PNMA6B-201ENST00000538162 1200 ntBASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 IKBKGP1-201ENST00000612193 1073 ntBASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 AC073111.5-205ENST00000641717 521 ntBASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNIH3Q8TBE1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.69■□□□□ 0.26
CNIH3Q8TBE1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms