Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 HLA-F-220ENST00000434407 884 ntBASIC19.36■□□□□ 0.69
UBA3Q8TBC4 KRT18P35-201ENST00000510488 1269 ntBASIC19.36■□□□□ 0.69
UBA3Q8TBC4 VENTXP5-201ENST00000523979 775 ntBASIC19.36■□□□□ 0.69
UBA3Q8TBC4 AC083849.1-201ENST00000615227 514 ntBASIC19.36■□□□□ 0.69
UBA3Q8TBC4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBA3Q8TBC4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 AL031133.1-201ENST00000406807 723 ntBASIC19.35■□□□□ 0.69
UBA3Q8TBC4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UBA3Q8TBC4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 SPDYE13P-201ENST00000445314 798 ntBASIC19.34■□□□□ 0.69
UBA3Q8TBC4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 AL445228.2-201ENST00000605589 952 ntBASIC19.34■□□□□ 0.69
UBA3Q8TBC4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA3Q8TBC4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 AC093677.2-201ENST00000600169 1863 ntBASIC19.33■□□□□ 0.69
UBA3Q8TBC4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.33■□□□□ 0.69
UBA3Q8TBC4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 AC087388.1-201ENST00000571370 1112 ntBASIC19.33■□□□□ 0.68
UBA3Q8TBC4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 PHGDH-209ENST00000641074 1780 ntBASIC19.33■□□□□ 0.68
UBA3Q8TBC4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 BICD1-207ENST00000551848 1962 ntBASIC19.33■□□□□ 0.68
UBA3Q8TBC4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBA3Q8TBC4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms