Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 MIR662-201ENST00000384847 95 ntBASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 MIR149-201ENST00000384879 89 ntBASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH20Q8N6Y1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 UPK3BP1-201ENST00000428678 509 ntBASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH20Q8N6Y1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH20Q8N6Y1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH20Q8N6Y1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDH20Q8N6Y1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH20Q8N6Y1 AL162741.1-201ENST00000565563 1558 ntBASIC18.64■□□□□ 0.58
PCDH20Q8N6Y1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH20Q8N6Y1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms