Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AC073621.1-201ENST00000392730 636 ntBASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AC004832.2-201ENST00000426397 482 ntBASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 GPX1P2-201ENST00000429271 606 ntBASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
COL27A1Q8IZC6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 FAM220CP-201ENST00000395253 831 ntBASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 NKAPP1-205ENST00000585790 367 ntBASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 LINC00602-201ENST00000629776 2065 ntBASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL27A1Q8IZC6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL27A1Q8IZC6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL27A1Q8IZC6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 PMS2P2-201ENST00000425039 1128 ntBASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 HLA-J-201ENST00000462773 1622 ntBASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
COL27A1Q8IZC6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 AC005332.7-201ENST00000614046 2005 ntBASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 UNC93B6-202ENST00000528242 690 ntBASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COL27A1Q8IZC6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 ALG1L5P-201ENST00000482043 771 ntBASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 AC040169.1-201ENST00000565382 521 ntBASIC17.12■□□□□ 0.33
COL27A1Q8IZC6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms