Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 AL049812.1-201ENST00000432563 2267 ntBASIC22.18■■□□□ 1.14
SLX4Q8IY92 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 AC007967.3-201ENST00000434308 558 ntBASIC22.17■■□□□ 1.14
SLX4Q8IY92 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 BX005266.1-201ENST00000473402 457 ntBASIC22.17■■□□□ 1.14
SLX4Q8IY92 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.17■■□□□ 1.14
SLX4Q8IY92 AC064836.3-201ENST00000607928 673 ntBASIC22.17■■□□□ 1.14
SLX4Q8IY92 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLX4Q8IY92 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 MCCD1P2-201ENST00000423228 335 ntBASIC22.16■■□□□ 1.14
SLX4Q8IY92 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 AL596442.2-201ENST00000610240 980 ntBASIC22.16■■□□□ 1.14
SLX4Q8IY92 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 AL499627.1-201ENST00000569373 2188 ntBASIC22.16■■□□□ 1.14
SLX4Q8IY92 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLX4Q8IY92 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 AL161938.1-201ENST00000569833 2180 ntBASIC22.16■■□□□ 1.14
SLX4Q8IY92 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 PCDHAC2-203ENST00000615316 3011 ntBASIC22.16■■□□□ 1.14
SLX4Q8IY92 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SLX4Q8IY92 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 HTR5BP-201ENST00000430851 1154 ntBASIC22.15■■□□□ 1.14
SLX4Q8IY92 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLX4Q8IY92 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 MIR1199-201ENST00000621445 119 ntBASIC22.15■■□□□ 1.14
SLX4Q8IY92 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.15■■□□□ 1.14
SLX4Q8IY92 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLX4Q8IY92 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLX4Q8IY92 AC002310.6-201ENST00000624451 1377 ntBASIC22.14■■□□□ 1.14
SLX4Q8IY92 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLX4Q8IY92 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.14■■□□□ 1.14
SLX4Q8IY92 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.14■■□□□ 1.13
SLX4Q8IY92 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLX4Q8IY92 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms