Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NUDCD3Q8IVD9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.2■□□□□ 0.5
NUDCD3Q8IVD9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NUDCD3Q8IVD9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.2■□□□□ 0.5
NUDCD3Q8IVD9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 PHGDH-209ENST00000641074 1780 ntBASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AC239809.2-201ENST00000415381 517 ntBASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AC004951.3-201ENST00000418645 1148 ntBASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUDCD3Q8IVD9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 NIFKP9-201ENST00000419265 221 ntBASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CKBP1-201ENST00000565489 1086 ntBASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUDCD3Q8IVD9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 AP003097.1-201ENST00000530657 1135 ntBASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 AC142086.2-201ENST00000569753 217 ntBASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 AC233263.1-201ENST00000578059 224 ntBASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 PCDHA12-202ENST00000613593 2588 ntBASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUDCD3Q8IVD9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms