Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AC008040.2-201ENST00000461049 708 ntBASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AL109659.2-201ENST00000606809 1674 ntBASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 AC018470.1-201ENST00000624790 3129 ntBASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 TSPY20P-201ENST00000450910 630 ntBASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 AC142381.4-202ENST00000563973 229 ntBASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SLC25A1P4-201ENST00000567977 778 ntBASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL55Q7Z7F7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms