Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 CD99P1-205ENST00000527459 561 ntBASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 C1QBPP2-201ENST00000528754 825 ntBASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 AL353708.3-201ENST00000610272 989 ntBASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 AC012317.2-201ENST00000623305 2251 ntBASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 AC091390.4-202ENST00000476426 537 ntBASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 AP002982.1-201ENST00000492365 877 ntBASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 FLJ13224-201ENST00000313737 1514 ntBASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCHD4Q6ZW05 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCHD4Q6ZW05 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 KSR1P1-201ENST00000446298 240 ntBASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 KRT8P3-201ENST00000519669 1449 ntBASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCHD4Q6ZW05 OR6D1P-203ENST00000641209 4860 ntBASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms