Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 VENTXP5-201ENST00000523979 775 ntBASIC19.18■□□□□ 0.66
RNF43Q68DV7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 AC083849.1-201ENST00000615227 514 ntBASIC19.18■□□□□ 0.66
RNF43Q68DV7 AC012313.10-201ENST00000623509 926 ntBASIC19.18■□□□□ 0.66
RNF43Q68DV7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF43Q68DV7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RNF43Q68DV7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 SPDYE13P-201ENST00000445314 798 ntBASIC19.17■□□□□ 0.66
RNF43Q68DV7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF43Q68DV7 AC112497.1-201ENST00000624824 639 ntBASIC19.17■□□□□ 0.66
RNF43Q68DV7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF43Q68DV7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 RASA4DP-201ENST00000460726 1199 ntBASIC19.16■□□□□ 0.66
RNF43Q68DV7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RNF43Q68DV7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF43Q68DV7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 AC020763.4-201ENST00000623414 4170 ntBASIC19.15■□□□□ 0.66
RNF43Q68DV7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms