Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 CROCCP2-202ENST00000412962 2773 ntBASIC17.25■□□□□ 0.35
LPCAT4Q643R3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 AL596257.1-201ENST00000641463 2694 ntBASIC17.24■□□□□ 0.35
LPCAT4Q643R3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DOC2GP-204ENST00000639052 2548 ntBASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT4Q643R3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.23■□□□□ 0.35
LPCAT4Q643R3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AC006557.6-201ENST00000623071 864 ntBASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AL355312.1-201ENST00000407115 2176 ntBASIC17.23■□□□□ 0.35
LPCAT4Q643R3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LPCAT4Q643R3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 DUX4L16-201ENST00000555130 1264 ntBASIC17.22■□□□□ 0.35
LPCAT4Q643R3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 LINC02199-201ENST00000506655 2702 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms