Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 AC141257.4-201ENST00000634557 245 ntBASIC21.85■■□□□ 1.09
RNF20Q5VTR2 AC136944.6-201ENST00000634818 245 ntBASIC21.85■■□□□ 1.09
RNF20Q5VTR2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 REXO1L9P-201ENST00000604264 2108 ntBASIC21.85■■□□□ 1.09
RNF20Q5VTR2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF20Q5VTR2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 AL096828.2-201ENST00000567259 1965 ntBASIC21.84■■□□□ 1.09
RNF20Q5VTR2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF20Q5VTR2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 LIN28AP1-201ENST00000429574 405 ntBASIC21.83■■□□□ 1.09
RNF20Q5VTR2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AL138966.2-201ENST00000621997 464 ntBASIC21.83■■□□□ 1.09
RNF20Q5VTR2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF20Q5VTR2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF20Q5VTR2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF20Q5VTR2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.83■■□□□ 1.08
RNF20Q5VTR2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF20Q5VTR2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 MIR3917-201ENST00000580971 93 ntBASIC21.82■■□□□ 1.08
RNF20Q5VTR2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 AC133561.5-201ENST00000635547 218 ntBASIC21.82■■□□□ 1.08
RNF20Q5VTR2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF20Q5VTR2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 AC138028.4-201ENST00000564984 1845 ntBASIC21.81■■□□□ 1.08
RNF20Q5VTR2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF20Q5VTR2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms