Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 AC141586.5-201ENST00000624546 2050 ntBASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00242Q5T6M2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 AC004951.3-201ENST00000418645 1148 ntBASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 CKBP1-201ENST00000565489 1086 ntBASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 AC069544.1-201ENST00000609399 999 ntBASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00242Q5T6M2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 MIR564-202ENST00000385049 94 ntBASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 KRASP1-201ENST00000407852 552 ntBASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 AC239809.2-201ENST00000415381 517 ntBASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 NIFKP9-201ENST00000419265 221 ntBASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 AL023875.1-201ENST00000640777 796 ntBASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00242Q5T6M2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms