Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 AC112777.1-201ENST00000540175 1423 ntBASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 CCR12P-201ENST00000446203 998 ntBASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 TSPY17P-201ENST00000450329 467 ntBASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 AL353719.1-201ENST00000566847 864 ntBASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDZK1Q5T2W1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDZK1Q5T2W1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 MIR564-202ENST00000385049 94 ntBASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 MIR3180-5-201ENST00000583743 153 ntBASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 AC036111.1-201ENST00000533973 1582 ntBASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDZK1Q5T2W1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 KRT8P9-201ENST00000558927 1449 ntBASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 BICD1-207ENST00000551848 1962 ntBASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 AC116562.4-202ENST00000641738 218 ntBASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 AL354751.1-201ENST00000412768 1863 ntBASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 AC092338.2-201ENST00000568827 1415 ntBASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.13■□□□□ 0.33
PDZK1Q5T2W1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.12■□□□□ 0.33
PDZK1Q5T2W1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms