Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 AL139400.1-201ENST00000366220 510 ntBASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 PGM5P2-202ENST00000637225 1043 ntBASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RSPO4Q2I0M5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
RSPO4Q2I0M5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 HLA-V-201ENST00000429037 534 ntBASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 DUX4L17-201ENST00000557360 1267 ntBASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 AC012645.4-201ENST00000610691 1061 ntBASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO4Q2I0M5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 AC068472.1-201ENST00000474589 881 ntBASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 AL138831.2-201ENST00000606564 490 ntBASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO4Q2I0M5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms