Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.5■□□□□ 0.71
CDR2Q01850 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR2Q01850 AC087499.1-201ENST00000418141 1075 ntBASIC19.5■□□□□ 0.71
CDR2Q01850 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR2Q01850 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 AC024243.1-201ENST00000609234 778 ntBASIC19.5■□□□□ 0.71
CDR2Q01850 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR2Q01850 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDR2Q01850 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR2Q01850 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 AC005332.8-201ENST00000622750 2735 ntBASIC19.49■□□□□ 0.71
CDR2Q01850 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 ECEL1P3-201ENST00000427961 737 ntBASIC19.49■□□□□ 0.71
CDR2Q01850 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 AC145285.6-201ENST00000604632 637 ntBASIC19.49■□□□□ 0.71
CDR2Q01850 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 FLJ13224-201ENST00000313737 1514 ntBASIC19.49■□□□□ 0.71
CDR2Q01850 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.49■□□□□ 0.71
CDR2Q01850 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDR2Q01850 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR2Q01850 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CDR2Q01850 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 AL024508.2-201ENST00000607749 1894 ntBASIC19.48■□□□□ 0.71
CDR2Q01850 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDR2Q01850 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDR2Q01850 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.48■□□□□ 0.71
CDR2Q01850 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.48■□□□□ 0.71
CDR2Q01850 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.48■□□□□ 0.71
CDR2Q01850 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.48■□□□□ 0.71
CDR2Q01850 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR2Q01850 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.48■□□□□ 0.71
CDR2Q01850 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.48■□□□□ 0.71
CDR2Q01850 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR2Q01850 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.48■□□□□ 0.71
CDR2Q01850 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CDR2Q01850 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.48■□□□□ 0.71
CDR2Q01850 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR2Q01850 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.47■□□□□ 0.71
CDR2Q01850 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDR2Q01850 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDR2Q01850 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.47■□□□□ 0.71
CDR2Q01850 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR2Q01850 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.47■□□□□ 0.71
CDR2Q01850 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms