Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.89■■□□□ 1.42
RIPK4P57078 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.89■■□□□ 1.42
RIPK4P57078 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RIPK4P57078 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RIPK4P57078 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RIPK4P57078 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.89■■□□□ 1.41
RIPK4P57078 ATP5G2P1-201ENST00000433580 426 ntBASIC23.89■■□□□ 1.41
RIPK4P57078 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.89■■□□□ 1.41
RIPK4P57078 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RIPK4P57078 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.89■■□□□ 1.41
RIPK4P57078 AC008687.5-201ENST00000593746 558 ntBASIC23.89■■□□□ 1.41
RIPK4P57078 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.89■■□□□ 1.41
RIPK4P57078 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RIPK4P57078 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.89■■□□□ 1.41
RIPK4P57078 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RIPK4P57078 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.89■■□□□ 1.41
RIPK4P57078 PHGDH-209ENST00000641074 1780 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.88■■□□□ 1.41
RIPK4P57078 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RIPK4P57078 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 CHCHD2P8-201ENST00000429873 447 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.88■■□□□ 1.41
RIPK4P57078 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.88■■□□□ 1.41
RIPK4P57078 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.88■■□□□ 1.41
RIPK4P57078 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RIPK4P57078 MIR3180-1-201ENST00000580374 94 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 MIR3180-3-201ENST00000584616 94 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RIPK4P57078 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 LINC00602-201ENST00000629776 2065 ntBASIC23.88■■□□□ 1.41
RIPK4P57078 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RIPK4P57078 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.87■■□□□ 1.41
RIPK4P57078 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.87■■□□□ 1.41
RIPK4P57078 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.87■■□□□ 1.41
RIPK4P57078 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
RIPK4P57078 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
RIPK4P57078 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.87■■□□□ 1.41
RIPK4P57078 AC135776.1-201ENST00000319817 2481 ntBASIC23.87■■□□□ 1.41
RIPK4P57078 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIPK4P57078 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.87■■□□□ 1.41
RIPK4P57078 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.86■■□□□ 1.41
RIPK4P57078 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.86■■□□□ 1.41
RIPK4P57078 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.86■■□□□ 1.41
RIPK4P57078 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.86■■□□□ 1.41
RIPK4P57078 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.86■■□□□ 1.41
RIPK4P57078 AC092119.3-201ENST00000612618 583 ntBASIC23.86■■□□□ 1.41
RIPK4P57078 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.86■■□□□ 1.41
RIPK4P57078 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.86■■□□□ 1.41
RIPK4P57078 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RIPK4P57078 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.86■■□□□ 1.41
RIPK4P57078 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIPK4P57078 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.85■■□□□ 1.41
RIPK4P57078 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.85■■□□□ 1.41
RIPK4P57078 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RIPK4P57078 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
RIPK4P57078 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.85■■□□□ 1.41
RIPK4P57078 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.85■■□□□ 1.41
RIPK4P57078 AP002414.4-201ENST00000589764 1148 ntBASIC23.85■■□□□ 1.41
RIPK4P57078 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RIPK4P57078 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.85■■□□□ 1.41
RIPK4P57078 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.85■■□□□ 1.41
RIPK4P57078 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 AC093677.2-201ENST00000600169 1863 ntBASIC23.85■■□□□ 1.41
RIPK4P57078 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIPK4P57078 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.85■■□□□ 1.41
RIPK4P57078 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RIPK4P57078 LINC00167-201ENST00000530583 1419 ntBASIC23.84■■□□□ 1.41
RIPK4P57078 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIPK4P57078 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIPK4P57078 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIPK4P57078 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIPK4P57078 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms