Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN8P56748 LINC01126-201ENST00000623515 1646 ntBASIC17.4■□□□□ 0.38
CLDN8P56748 AC092338.2-201ENST00000568827 1415 ntBASIC17.4■□□□□ 0.38
CLDN8P56748 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN8P56748 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.4■□□□□ 0.38
CLDN8P56748 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN8P56748 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN8P56748 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN8P56748 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 AC009065.1-201ENST00000564055 1225 ntBASIC17.4■□□□□ 0.38
CLDN8P56748 MIR3180-4-201ENST00000582223 153 ntBASIC17.4■□□□□ 0.38
CLDN8P56748 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN8P56748 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN8P56748 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
CLDN8P56748 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN8P56748 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN8P56748 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN8P56748 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN8P56748 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLDN8P56748 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CLDN8P56748 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CLDN8P56748 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLDN8P56748 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN8P56748 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 CCR12P-201ENST00000446203 998 ntBASIC17.39■□□□□ 0.37
CLDN8P56748 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN8P56748 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN8P56748 BX088651.1-201ENST00000540551 451 ntBASIC17.39■□□□□ 0.37
CLDN8P56748 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN8P56748 AC104390.1-201ENST00000555663 520 ntBASIC17.39■□□□□ 0.37
CLDN8P56748 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN8P56748 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN8P56748 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN8P56748 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN8P56748 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN8P56748 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN8P56748 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.37
CLDN8P56748 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLDN8P56748 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 KRT18P55-202ENST00000578578 1546 ntBASIC17.38■□□□□ 0.37
CLDN8P56748 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN8P56748 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN8P56748 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN8P56748 FITM1-202ENST00000559294 800 ntBASIC17.38■□□□□ 0.37
CLDN8P56748 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN8P56748 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN8P56748 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN8P56748 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN8P56748 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLDN8P56748 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms