Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3AP56704 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3AP56704 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
WNT3AP56704 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
WNT3AP56704 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.49■□□□□ 0.55
WNT3AP56704 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
WNT3AP56704 REXO1L9P-201ENST00000604264 2108 ntBASIC18.49■□□□□ 0.55
WNT3AP56704 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.49■□□□□ 0.55
WNT3AP56704 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 AL096828.2-201ENST00000567259 1965 ntBASIC18.48■□□□□ 0.55
WNT3AP56704 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.48■□□□□ 0.55
WNT3AP56704 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 RASA4DP-201ENST00000460726 1199 ntBASIC18.48■□□□□ 0.55
WNT3AP56704 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT3AP56704 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT3AP56704 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT3AP56704 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.48■□□□□ 0.55
WNT3AP56704 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
WNT3AP56704 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT3AP56704 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
WNT3AP56704 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.48■□□□□ 0.55
WNT3AP56704 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
WNT3AP56704 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
WNT3AP56704 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.47■□□□□ 0.55
WNT3AP56704 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
WNT3AP56704 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
WNT3AP56704 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
WNT3AP56704 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 PVRIG2P-201ENST00000435460 978 ntBASIC18.47■□□□□ 0.55
WNT3AP56704 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.47■□□□□ 0.55
WNT3AP56704 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.47■□□□□ 0.55
WNT3AP56704 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
WNT3AP56704 AC006011.2-201ENST00000621313 1158 ntBASIC18.47■□□□□ 0.55
WNT3AP56704 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.47■□□□□ 0.55
WNT3AP56704 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.47■□□□□ 0.55
WNT3AP56704 NOC2LP1-202ENST00000452600 2235 ntBASIC18.47■□□□□ 0.55
WNT3AP56704 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
WNT3AP56704 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
WNT3AP56704 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.46■□□□□ 0.55
WNT3AP56704 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
WNT3AP56704 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.46■□□□□ 0.55
WNT3AP56704 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.46■□□□□ 0.55
WNT3AP56704 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.46■□□□□ 0.55
WNT3AP56704 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
WNT3AP56704 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
WNT3AP56704 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
WNT3AP56704 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
WNT3AP56704 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
WNT3AP56704 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms