Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.12■□□□□ 0.81
PMS1P54277 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.12■□□□□ 0.81
PMS1P54277 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
PMS1P54277 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 AC066615.1-201ENST00000640911 628 ntBASIC20.12■□□□□ 0.81
PMS1P54277 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 LINC00896-202ENST00000609602 2128 ntBASIC20.12■□□□□ 0.81
PMS1P54277 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PMS1P54277 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PMS1P54277 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.11■□□□□ 0.81
PMS1P54277 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.11■□□□□ 0.81
PMS1P54277 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.11■□□□□ 0.81
PMS1P54277 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.11■□□□□ 0.81
PMS1P54277 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PMS1P54277 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
PMS1P54277 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PMS1P54277 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.11■□□□□ 0.81
PMS1P54277 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PMS1P54277 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 AC012317.2-201ENST00000623305 2251 ntBASIC20.1■□□□□ 0.81
PMS1P54277 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.1■□□□□ 0.81
PMS1P54277 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 SLC25A6P5-201ENST00000435663 894 ntBASIC20.1■□□□□ 0.81
PMS1P54277 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.1■□□□□ 0.81
PMS1P54277 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.1■□□□□ 0.81
PMS1P54277 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.1■□□□□ 0.81
PMS1P54277 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.1■□□□□ 0.81
PMS1P54277 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 AC128688.1-201ENST00000487626 519 ntBASIC20.1■□□□□ 0.81
PMS1P54277 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.1■□□□□ 0.81
PMS1P54277 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.1■□□□□ 0.81
PMS1P54277 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS1P54277 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.1■□□□□ 0.81
PMS1P54277 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS1P54277 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PMS1P54277 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.09■□□□□ 0.81
PMS1P54277 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.09■□□□□ 0.81
PMS1P54277 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.09■□□□□ 0.81
PMS1P54277 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.09■□□□□ 0.81
PMS1P54277 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PMS1P54277 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.09■□□□□ 0.81
PMS1P54277 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.09■□□□□ 0.81
PMS1P54277 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.09■□□□□ 0.81
PMS1P54277 MIR3180-4-201ENST00000582223 153 ntBASIC20.09■□□□□ 0.81
PMS1P54277 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PMS1P54277 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms