Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP9P49458 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SRP9P49458 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.25■□□□□ 0.19
SRP9P49458 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SRP9P49458 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.25■□□□□ 0.19
SRP9P49458 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 SIRPAP1-201ENST00000448467 1770 ntBASIC16.24■□□□□ 0.19
SRP9P49458 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.24■□□□□ 0.19
SRP9P49458 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 PRSS44-201ENST00000515154 1146 ntBASIC16.24■□□□□ 0.19
SRP9P49458 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 AP000692.2-201ENST00000608391 879 ntBASIC16.24■□□□□ 0.19
SRP9P49458 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 AC012317.2-201ENST00000623305 2251 ntBASIC16.24■□□□□ 0.19
SRP9P49458 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRP9P49458 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.24■□□□□ 0.19
SRP9P49458 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP9P49458 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRP9P49458 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 MESTP1-201ENST00000404287 994 ntBASIC16.23■□□□□ 0.19
SRP9P49458 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.23■□□□□ 0.19
SRP9P49458 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.23■□□□□ 0.19
SRP9P49458 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRP9P49458 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SRP9P49458 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.23■□□□□ 0.19
SRP9P49458 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRP9P49458 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP9P49458 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.23■□□□□ 0.19
SRP9P49458 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.23■□□□□ 0.19
SRP9P49458 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.23■□□□□ 0.19
SRP9P49458 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms