Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTSOP43234 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSOP43234 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTSOP43234 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 LINC00602-201ENST00000629776 2065 ntBASIC18.5■□□□□ 0.55
CTSOP43234 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSOP43234 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 AC113404.2-201ENST00000507884 177 ntBASIC18.5■□□□□ 0.55
CTSOP43234 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSOP43234 AC074051.2-201ENST00000565115 352 ntBASIC18.5■□□□□ 0.55
CTSOP43234 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSOP43234 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 TNXA-203ENST00000507684 2038 ntBASIC18.5■□□□□ 0.55
CTSOP43234 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSOP43234 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSOP43234 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSOP43234 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 UNC93B7-201ENST00000509439 705 ntBASIC18.49■□□□□ 0.55
CTSOP43234 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.49■□□□□ 0.55
CTSOP43234 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.49■□□□□ 0.55
CTSOP43234 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSOP43234 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.49■□□□□ 0.55
CTSOP43234 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSOP43234 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CTSOP43234 BX323043.1-201ENST00000641006 1765 ntBASIC18.48■□□□□ 0.55
CTSOP43234 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSOP43234 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 FOSL1P1-201ENST00000511041 816 ntBASIC18.48■□□□□ 0.55
CTSOP43234 AC012615.1-201ENST00000565797 1299 ntBASIC18.48■□□□□ 0.55
CTSOP43234 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSOP43234 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CTSOP43234 AL732292.2-201ENST00000609649 430 ntBASIC18.48■□□□□ 0.55
CTSOP43234 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSOP43234 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSOP43234 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CTSOP43234 WIZP1-201ENST00000531444 2299 ntBASIC18.48■□□□□ 0.55
CTSOP43234 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSOP43234 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSOP43234 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSOP43234 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms