Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CTGFP29279 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.54■□□□□ 0.88
CTGFP29279 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.53■□□□□ 0.88
CTGFP29279 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 AC108751.1-201ENST00000490852 363 ntBASIC20.53■□□□□ 0.88
CTGFP29279 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.53■□□□□ 0.88
CTGFP29279 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.53■□□□□ 0.88
CTGFP29279 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTGFP29279 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTGFP29279 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTGFP29279 AC079776.2-201ENST00000641154 1609 ntBASIC20.53■□□□□ 0.88
CTGFP29279 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
CTGFP29279 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTGFP29279 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.52■□□□□ 0.88
CTGFP29279 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.52■□□□□ 0.88
CTGFP29279 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CTGFP29279 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTGFP29279 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.52■□□□□ 0.88
CTGFP29279 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.52■□□□□ 0.88
CTGFP29279 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.52■□□□□ 0.88
CTGFP29279 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTGFP29279 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTGFP29279 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CTGFP29279 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.52■□□□□ 0.88
CTGFP29279 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CTGFP29279 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.52■□□□□ 0.87
CTGFP29279 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTGFP29279 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.51■□□□□ 0.87
CTGFP29279 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.51■□□□□ 0.87
CTGFP29279 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
CTGFP29279 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTGFP29279 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTGFP29279 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CTGFP29279 KRT18P65-201ENST00000439811 1286 ntBASIC20.51■□□□□ 0.87
CTGFP29279 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.51■□□□□ 0.87
CTGFP29279 AC112698.1-201ENST00000510299 916 ntBASIC20.51■□□□□ 0.87
CTGFP29279 SNHG9-202ENST00000564014 471 ntBASIC20.51■□□□□ 0.87
CTGFP29279 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CTGFP29279 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CTGFP29279 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.51■□□□□ 0.87
CTGFP29279 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.51■□□□□ 0.87
CTGFP29279 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.51■□□□□ 0.87
CTGFP29279 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 AC097374.2-201ENST00000618617 1306 ntBASIC20.51■□□□□ 0.87
CTGFP29279 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTGFP29279 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CTGFP29279 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CTGFP29279 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CTGFP29279 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTGFP29279 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.5■□□□□ 0.87
CTGFP29279 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.5■□□□□ 0.87
CTGFP29279 AC254562.1-201ENST00000417586 456 ntBASIC20.5■□□□□ 0.87
CTGFP29279 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.5■□□□□ 0.87
CTGFP29279 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.5■□□□□ 0.87
CTGFP29279 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CTGFP29279 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.5■□□□□ 0.87
CTGFP29279 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.5■□□□□ 0.87
CTGFP29279 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 AL022326.1-202ENST00000641533 845 ntBASIC20.5■□□□□ 0.87
CTGFP29279 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.5■□□□□ 0.87
CTGFP29279 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.5■□□□□ 0.87
CTGFP29279 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
CTGFP29279 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTGFP29279 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.49■□□□□ 0.87
CTGFP29279 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTGFP29279 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms