Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CHMP24386 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP24386 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP24386 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP24386 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP24386 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP24386 ATP5G1P1-201ENST00000448724 379 ntBASIC17.1■□□□□ 0.33
CHMP24386 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 AC073508.3-201ENST00000619697 1419 ntBASIC17.1■□□□□ 0.33
CHMP24386 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP24386 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP24386 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP24386 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP24386 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP24386 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 RN7SL850P-201ENST00000579959 291 ntBASIC17.09■□□□□ 0.33
CHMP24386 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CHMP24386 AC068587.9-201ENST00000641814 219 ntBASIC17.09■□□□□ 0.33
CHMP24386 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHMP24386 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CHMP24386 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP24386 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CHMP24386 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP24386 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP24386 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CHMP24386 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP24386 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP24386 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP24386 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.08■□□□□ 0.32
CHMP24386 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.08■□□□□ 0.32
CHMP24386 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 KRT8P3-201ENST00000519669 1449 ntBASIC17.08■□□□□ 0.32
CHMP24386 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms