Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
RFX1P22670 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 AC093677.2-201ENST00000600169 1863 ntBASIC19.9■□□□□ 0.78
RFX1P22670 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.9■□□□□ 0.78
RFX1P22670 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.9■□□□□ 0.78
RFX1P22670 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.9■□□□□ 0.78
RFX1P22670 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.9■□□□□ 0.78
RFX1P22670 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.9■□□□□ 0.78
RFX1P22670 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RFX1P22670 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.9■□□□□ 0.78
RFX1P22670 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX1P22670 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX1P22670 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX1P22670 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RFX1P22670 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RFX1P22670 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX1P22670 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX1P22670 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFX1P22670 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RFX1P22670 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFX1P22670 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX1P22670 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX1P22670 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX1P22670 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
RFX1P22670 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX1P22670 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX1P22670 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
RFX1P22670 AC009065.1-201ENST00000564055 1225 ntBASIC19.88■□□□□ 0.77
RFX1P22670 AL441883.1-201ENST00000566170 1045 ntBASIC19.88■□□□□ 0.77
RFX1P22670 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
RFX1P22670 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RFX1P22670 CR769767.2-201ENST00000622735 460 ntBASIC19.88■□□□□ 0.77
RFX1P22670 AC116407.4-201ENST00000623319 1061 ntBASIC19.88■□□□□ 0.77
RFX1P22670 AC135776.1-201ENST00000319817 2481 ntBASIC19.88■□□□□ 0.77
RFX1P22670 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX1P22670 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX1P22670 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFX1P22670 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFX1P22670 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFX1P22670 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFX1P22670 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX1P22670 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 MIR149-201ENST00000384879 89 ntBASIC19.87■□□□□ 0.77
RFX1P22670 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFX1P22670 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.87■□□□□ 0.77
RFX1P22670 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.87■□□□□ 0.77
RFX1P22670 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.87■□□□□ 0.77
RFX1P22670 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms