Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CAPN3P20807 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.62■□□□□ 0.41
CAPN3P20807 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
CAPN3P20807 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CAPN3P20807 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.62■□□□□ 0.41
CAPN3P20807 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
CAPN3P20807 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CAPN3P20807 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN3P20807 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN3P20807 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CAPN3P20807 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 AP003071.4-201ENST00000562276 1284 ntBASIC17.61■□□□□ 0.41
CAPN3P20807 AC145285.6-201ENST00000604632 637 ntBASIC17.61■□□□□ 0.41
CAPN3P20807 AC011298.2-201ENST00000617989 482 ntBASIC17.61■□□□□ 0.41
CAPN3P20807 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.61■□□□□ 0.41
CAPN3P20807 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.61■□□□□ 0.41
CAPN3P20807 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.61■□□□□ 0.41
CAPN3P20807 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN3P20807 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 PHGDH-209ENST00000641074 1780 ntBASIC17.61■□□□□ 0.41
CAPN3P20807 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN3P20807 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 AL645608.8-201ENST00000606034 2086 ntBASIC17.6■□□□□ 0.41
CAPN3P20807 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN3P20807 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CAPN3P20807 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CAPN3P20807 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.6■□□□□ 0.41
CAPN3P20807 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.6■□□□□ 0.41
CAPN3P20807 AC008622.2-201ENST00000617006 1229 ntBASIC17.6■□□□□ 0.41
CAPN3P20807 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.6■□□□□ 0.41
CAPN3P20807 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN3P20807 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN3P20807 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN3P20807 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 AC099343.3-201ENST00000605834 2503 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms