Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.21■□□□□ 0.67
PDGFRAP16234 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 ARMC10P1-201ENST00000313754 855 ntBASIC19.2■□□□□ 0.66
PDGFRAP16234 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.2■□□□□ 0.66
PDGFRAP16234 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFRAP16234 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.2■□□□□ 0.66
PDGFRAP16234 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.2■□□□□ 0.66
PDGFRAP16234 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PDGFRAP16234 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFRAP16234 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PDGFRAP16234 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.19■□□□□ 0.66
PDGFRAP16234 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.19■□□□□ 0.66
PDGFRAP16234 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PDGFRAP16234 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDGFRAP16234 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.19■□□□□ 0.66
PDGFRAP16234 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC092647.4-201ENST00000457211 535 ntBASIC19.19■□□□□ 0.66
PDGFRAP16234 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.19■□□□□ 0.66
PDGFRAP16234 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.19■□□□□ 0.66
PDGFRAP16234 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AL157888.1-201ENST00000631930 593 ntBASIC19.19■□□□□ 0.66
PDGFRAP16234 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PDGFRAP16234 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PDGFRAP16234 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDGFRAP16234 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDGFRAP16234 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PDGFRAP16234 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFRAP16234 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFRAP16234 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFRAP16234 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.18■□□□□ 0.66
PDGFRAP16234 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFRAP16234 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFRAP16234 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDGFRAP16234 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFRAP16234 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDGFRAP16234 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFRAP16234 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms