Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.91■■□□□ 1.1
APPP05067 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.91■■□□□ 1.1
APPP05067 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.91■■□□□ 1.1
APPP05067 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.91■■□□□ 1.1
APPP05067 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.91■■□□□ 1.1
APPP05067 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
APPP05067 AC091076.1-201ENST00000610741 619 ntBASIC21.91■■□□□ 1.1
APPP05067 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
APPP05067 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
APPP05067 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.91■■□□□ 1.1
APPP05067 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.91■■□□□ 1.1
APPP05067 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.91■■□□□ 1.1
APPP05067 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPP05067 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
APPP05067 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.9■■□□□ 1.1
APPP05067 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
APPP05067 AL138781.2-201ENST00000617896 1843 ntBASIC21.9■■□□□ 1.1
APPP05067 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.9■■□□□ 1.1
APPP05067 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.9■■□□□ 1.1
APPP05067 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 AP000550.4-202ENST00000639755 178 ntBASIC21.9■■□□□ 1.1
APPP05067 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
APPP05067 AL162741.1-201ENST00000565563 1558 ntBASIC21.9■■□□□ 1.1
APPP05067 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
APPP05067 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
APPP05067 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
APPP05067 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPP05067 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.89■■□□□ 1.1
APPP05067 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.89■■□□□ 1.09
APPP05067 MIR662-201ENST00000384847 95 ntBASIC21.89■■□□□ 1.09
APPP05067 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.89■■□□□ 1.09
APPP05067 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.89■■□□□ 1.09
APPP05067 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.89■■□□□ 1.09
APPP05067 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
APPP05067 AC024563.2-201ENST00000603282 481 ntBASIC21.89■■□□□ 1.09
APPP05067 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.89■■□□□ 1.09
APPP05067 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.89■■□□□ 1.09
APPP05067 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.89■■□□□ 1.09
APPP05067 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPP05067 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.88■■□□□ 1.09
APPP05067 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.88■■□□□ 1.09
APPP05067 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.88■■□□□ 1.09
APPP05067 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
APPP05067 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.88■■□□□ 1.09
APPP05067 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
APPP05067 KRT18P48-201ENST00000434763 852 ntBASIC21.88■■□□□ 1.09
APPP05067 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.88■■□□□ 1.09
APPP05067 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.88■■□□□ 1.09
APPP05067 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 AC104581.1-202ENST00000635932 2618 ntBASIC21.88■■□□□ 1.09
APPP05067 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPP05067 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.87■■□□□ 1.09
APPP05067 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.87■■□□□ 1.09
APPP05067 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
APPP05067 AC073592.3-201ENST00000625118 1834 ntBASIC21.87■■□□□ 1.09
APPP05067 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPP05067 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPP05067 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
APPP05067 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPP05067 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms