Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC026396.1-201ENST00000419388 421 ntBASIC19.1■□□□□ 0.65
OPHN1O60890 DUSP5P1-201ENST00000441325 1139 ntBASIC19.1■□□□□ 0.65
OPHN1O60890 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
OPHN1O60890 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.1■□□□□ 0.65
OPHN1O60890 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.1■□□□□ 0.65
OPHN1O60890 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
OPHN1O60890 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 KRT8P45-201ENST00000414328 1447 ntBASIC19.09■□□□□ 0.65
OPHN1O60890 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 AL499627.1-201ENST00000569373 2188 ntBASIC19.09■□□□□ 0.65
OPHN1O60890 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
OPHN1O60890 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 HCG4P8-203ENST00000443049 980 ntBASIC19.09■□□□□ 0.65
OPHN1O60890 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 AL671277.2-201ENST00000458060 996 ntBASIC19.09■□□□□ 0.65
OPHN1O60890 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.09■□□□□ 0.65
OPHN1O60890 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.09■□□□□ 0.65
OPHN1O60890 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.09■□□□□ 0.65
OPHN1O60890 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.09■□□□□ 0.65
OPHN1O60890 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
OPHN1O60890 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.09■□□□□ 0.65
OPHN1O60890 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
OPHN1O60890 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPHN1O60890 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.08■□□□□ 0.65
OPHN1O60890 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
OPHN1O60890 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.08■□□□□ 0.65
OPHN1O60890 BICD1-207ENST00000551848 1962 ntBASIC19.08■□□□□ 0.65
OPHN1O60890 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
OPHN1O60890 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
OPHN1O60890 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
OPHN1O60890 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
OPHN1O60890 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 AL359075.1-203ENST00000462729 1002 ntBASIC19.08■□□□□ 0.64
OPHN1O60890 CA15P1-201ENST00000481698 905 ntBASIC19.08■□□□□ 0.64
OPHN1O60890 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.08■□□□□ 0.64
OPHN1O60890 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
OPHN1O60890 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
OPHN1O60890 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
OPHN1O60890 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.08■□□□□ 0.64
OPHN1O60890 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPHN1O60890 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.07■□□□□ 0.64
OPHN1O60890 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
OPHN1O60890 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.07■□□□□ 0.64
OPHN1O60890 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.07■□□□□ 0.64
OPHN1O60890 AC008622.2-201ENST00000617006 1229 ntBASIC19.07■□□□□ 0.64
OPHN1O60890 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.07■□□□□ 0.64
OPHN1O60890 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms