Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL031133.1-201ENST00000406807 723 ntBASIC17.22■□□□□ 0.35
CLDN4O14493 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN4O14493 AC024563.2-201ENST00000603282 481 ntBASIC17.22■□□□□ 0.35
CLDN4O14493 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 HYMAI.1-201ENST00000620949 238 ntBASIC17.22■□□□□ 0.35
CLDN4O14493 AL121956.5-201ENST00000625261 221 ntBASIC17.22■□□□□ 0.35
CLDN4O14493 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN4O14493 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN4O14493 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN4O14493 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN4O14493 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN4O14493 AL445228.2-201ENST00000605589 952 ntBASIC17.21■□□□□ 0.35
CLDN4O14493 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN4O14493 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN4O14493 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN4O14493 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 AC099343.3-201ENST00000605834 2503 ntBASIC17.21■□□□□ 0.35
CLDN4O14493 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN4O14493 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN4O14493 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.21■□□□□ 0.34
CLDN4O14493 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CLDN4O14493 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CLDN4O14493 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.21■□□□□ 0.34
CLDN4O14493 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN4O14493 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
CLDN4O14493 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN4O14493 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 KRT18P48-201ENST00000434763 852 ntBASIC17.2■□□□□ 0.34
CLDN4O14493 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN4O14493 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN4O14493 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN4O14493 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN4O14493 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN4O14493 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN4O14493 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN4O14493 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN4O14493 PKD1P1-201ENST00000458669 6805 ntBASIC17.19■□□□□ 0.34
CLDN4O14493 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN4O14493 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN4O14493 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN4O14493 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN4O14493 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN4O14493 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN4O14493 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN4O14493 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN4O14493 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN4O14493 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms