Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KPNA4O00629 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.13■□□□□ 0.33
KPNA4O00629 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
KPNA4O00629 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 KSR1P1-201ENST00000446298 240 ntBASIC17.13■□□□□ 0.33
KPNA4O00629 FAM201B-201ENST00000458407 597 ntBASIC17.13■□□□□ 0.33
KPNA4O00629 AC091390.4-202ENST00000476426 537 ntBASIC17.13■□□□□ 0.33
KPNA4O00629 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.13■□□□□ 0.33
KPNA4O00629 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 AL499627.1-201ENST00000569373 2188 ntBASIC17.13■□□□□ 0.33
KPNA4O00629 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.13■□□□□ 0.33
KPNA4O00629 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KPNA4O00629 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KPNA4O00629 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KPNA4O00629 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KPNA4O00629 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KPNA4O00629 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.12■□□□□ 0.33
KPNA4O00629 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.12■□□□□ 0.33
KPNA4O00629 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.12■□□□□ 0.33
KPNA4O00629 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.12■□□□□ 0.33
KPNA4O00629 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 AL391005.1-201ENST00000623953 2435 ntBASIC17.12■□□□□ 0.33
KPNA4O00629 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.12■□□□□ 0.33
KPNA4O00629 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.12■□□□□ 0.33
KPNA4O00629 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KPNA4O00629 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KPNA4O00629 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
KPNA4O00629 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KPNA4O00629 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.11■□□□□ 0.33
KPNA4O00629 AC004951.3-201ENST00000418645 1148 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 AL353807.1-201ENST00000427475 662 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 PRSS44-201ENST00000515154 1146 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 AL353708.3-201ENST00000610272 989 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 AC011298.2-201ENST00000617989 482 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 GNAS-203ENST00000306120 1878 ntBASIC17.11■□□□□ 0.33
KPNA4O00629 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KPNA4O00629 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KPNA4O00629 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KPNA4O00629 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms