Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC28A1O00337 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 CCR12P-201ENST00000446203 998 ntBASIC17.63■□□□□ 0.41
SLC28A1O00337 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 CR769767.2-201ENST00000622735 460 ntBASIC17.63■□□□□ 0.41
SLC28A1O00337 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC28A1O00337 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC28A1O00337 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.62■□□□□ 0.41
SLC28A1O00337 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A1O00337 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC28A1O00337 RBM17P1-201ENST00000453646 1190 ntBASIC17.62■□□□□ 0.41
SLC28A1O00337 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC28A1O00337 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC28A1O00337 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A1O00337 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC28A1O00337 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC28A1O00337 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.61■□□□□ 0.41
SLC28A1O00337 BX088651.1-201ENST00000540551 451 ntBASIC17.61■□□□□ 0.41
SLC28A1O00337 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC28A1O00337 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A1O00337 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A1O00337 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A1O00337 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A1O00337 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A1O00337 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC28A1O00337 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A1O00337 MIR718-201ENST00000390190 70 ntBASIC17.6■□□□□ 0.41
SLC28A1O00337 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms