Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 AL024508.2-201ENST00000607749 1894 ntBASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM200CA6NKL6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 AP003733.1-201ENST00000491725 852 ntBASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 KRT126P-201ENST00000549467 1181 ntBASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 AC005332.3-201ENST00000589904 676 ntBASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 AC069148.1-201ENST00000608741 768 ntBASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 KRT89P-201ENST00000620027 1478 ntBASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM200CA6NKL6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 Z83836.1-201ENST00000624605 1642 ntBASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 KRT18P48-201ENST00000434763 852 ntBASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AL390719.2-201ENST00000606993 987 ntBASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 NPAP1P7-201ENST00000613027 823 ntBASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM200CA6NKL6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM200CA6NKL6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM200CA6NKL6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TMEM200CA6NKL6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM200CA6NKL6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 LINC01126-201ENST00000623515 1646 ntBASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 IGHGP-201ENST00000390555 1178 ntBASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 TSPY22P-201ENST00000427496 604 ntBASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 KRT8P26-201ENST00000534154 1276 ntBASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 AC093458.2-201ENST00000623150 629 ntBASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM200CA6NKL6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms