Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 GMCL1P1-201ENST00000463439 1581 ntBASIC15.64■□□□□ 0.09
TMEM235A6NFC5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM235A6NFC5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 PHGDH-209ENST00000641074 1780 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 MTDHP1-201ENST00000605323 784 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AL445675.2-201ENST00000620291 557 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AC131212.4-201ENST00000623606 975 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AC099343.3-201ENST00000605834 2503 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 AC141586.5-201ENST00000624546 2050 ntBASIC15.63■□□□□ 0.09
TMEM235A6NFC5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM235A6NFC5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM235A6NFC5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms