Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 AC069152.1-201ENST00000438030 544 ntBASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 KRT8P50-201ENST00000562022 1438 ntBASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV27A0A0K0K1C4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 KRT17P3-201ENST00000420566 1262 ntBASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV27A0A0K0K1C4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms