Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 AC135050.7-201ENST00000624508 2218 ntBASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 MMP23A-201ENST00000234610 1017 ntBASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV1A0A0A0MS02 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AC018470.1-201ENST00000624790 3129 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AL390961.4-201ENST00000623958 2535 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 KRT18P23-201ENST00000435622 1283 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 TSPY15P-201ENST00000457163 923 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 EGLN1P1-201ENST00000531623 762 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AC066615.1-201ENST00000640911 628 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AC092338.2-201ENST00000568827 1415 ntBASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRGV1A0A0A0MS02 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 AL596275.1-201ENST00000423464 877 ntBASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 AC007663.1-201ENST00000438948 1240 ntBASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 KRT18P41-201ENST00000518924 1277 ntBASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 CR769767.2-201ENST00000622735 460 ntBASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV1A0A0A0MS02 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms